BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019A08SP1|AL427418
(969 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1148 1823 0.0
>3x_Contig1148
Length = 4745
Score = 1823 bits (919), Expect = 0.0
Identities = 926/927 (99%), Gaps = 1/927 (0%)
Strand = Plus / Minus
Query: 34 ggctagattgcctgatggtggctggtctgctccttctgccatcgcaatggctggtgctgg 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3840 ggctagattgcctgatggtggctggtctgctccttctgccatcgcaatggctggtgctgg 3781
Query: 94 tgctggtggtatggtagggcttgaattgaccgattttgttttcatcttgaacactgcgga 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3780 tgctggtggtatggtagggcttgaattgaccgattttgttttcatcttgaacactgcgga 3721
Query: 154 tgcagttaaatctttttcacagttcggttctatcactttgggtggtaacgtctctgttgc 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3720 tgcagttaaatctttttcacagttcggttctatcactttgggtggtaacgtctctgttgc 3661
Query: 214 ggctggtccattgggtagaaacgcagaagctgcagcttctgcatccactagcggtgttgc 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3660 ggctggtccattgggtagaaacgcagaagctgcagcttctgcatccactagcggtgttgc 3601
Query: 274 tgccatcttcgcttattctaagactaaaggtttatttgccggtgtctcgttagaaggttc 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3600 tgccatcttcgcttattctaagactaaaggtttatttgccggtgtctcgttagaaggttc 3541
Query: 334 ggtgatcattgaaagaagagaggcaaacagaaagttctacggtaacaattgtaccgcaaa 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3540 ggtgatcattgaaagaagagaggcaaacagaaagttctacggtaacaattgtaccgcaaa 3481
Query: 394 gatgattctatctggccgtgtcagacctcctccatcggtagaccctctattccgtgttct 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3480 gatgattctatctggccgtgtcagacctcctccatcggtagaccctctattccgtgttct 3421
Query: 454 agagtcccgtgccttcaactatagatctccaagaggtgacaactacgatgatgatgacga 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3420 agagtcccgtgccttcaactatagatctccaagaggtgacaactacgatgatgatgacga 3361
Query: 514 ctacgacgaagacgaagacggagagtactataacgatatcccatctagcttcgattcaga 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3360 ctacgacgaagacgaagacggagagtactataacgatatcccatctagcttcgattcaga 3301
Query: 574 tgatttggattctcaaagacctaacactagatccactagaagaagggctaattcatacag 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3300 tgatttggattctcaaagacctaacactagatccactagaagaagggctaattcatacag 3241
Query: 634 atctacaactagcgatgactcggatgattacctggatgaagatgaagaacgctactcatc 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3240 atctacaactagcgatgactcggatgattacctggatgaagatgaagaacgctactcatc 3181
Query: 694 atctcgttattctaggagacaaggaccctcttctaactctcgttgggaagatgaagttta 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3180 atctcgttattctaggagacaaggaccctcttctaactctcgttgggaagatgaagttta 3121
Query: 754 tgacttaaatgatagattcgaaagaacaaacctcaatacaaggaacgctagaggtggtcc 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3120 tgacttaaatgatagattcgaaagaacaaacctcaatacaaggaacgctagaggtggtcc 3061
Query: 814 ttcaagaccaaaatcggaaaaaccagactttgggatccagttcgttctcccgtggtagcc 873
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3060 ttcaagaccaaaatcggaaaaaccagacttt-ggatccagttcgttctcccgtggtagcc 3002
Query: 874 caagaggtaactcttctgctaactctccagctagaaattccggtgcaccaaaggctgtag 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 caagaggtaactcttctgctaactctccagctagaaattccggtgcaccaaaggctgtag 2942
Query: 934 ctctttacactttcaaaggtgaagaaa 960
|||||||||||||||||||||||||||
Sbjct: 2941 ctctttacactttcaaaggtgaagaaa 2915
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7159
Number of Sequences: 1807
Number of extensions: 7159
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 969
length of database: 10,358,551
effective HSP length: 16
effective length of query: 953
effective length of database: 10,329,639
effective search space: 9844145967
effective search space used: 9844145967
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)